Package 'DCC'

Description

Applies a codebook to a dataset: per variable it can rename, recode values, declare missing codes, coerce type, and attach a label, value labels, and a role. The preview (dry_run = TRUE) describes every change and changes nothing; dry_run = FALSE returns a new dcc_data with a codebook provenance record. The raw input is never overwritten, and the preview and apply share one planner, so a change is previewed exactly as applied. Unknown variables and impossible type coercions raise dcc_codebook_error.

Usage

dcc_apply_codebook(x, codebook, dry_run = TRUE)

Arguments

Value

A dcc_codebook_preview (dry run) or a new dcc_data.

See Also

dcc_codebook_changes.

Examples

df <- data.frame(sid = c("S1", "S2"), age = c(25, -99),
                 sex = c("1", "2"), stringsAsFactors = FALSE)
cb <- list(
  age = list(missing = -99, type = "integer"),
  sex = list(rename = "gender", recode = c("1" = "M", "2" = "F"),
             label = "Gender")
)
dcc_apply_codebook(df, cb)
dcc_apply_codebook(df, cb, dry_run = FALSE)

Description

Access the machine-readable audit log and the cleaned dataset produced by the Execute stage. The audit log is the backbone of DCC's auditable-reporting guarantee: every row records one change traceable to one finding.

Usage

dcc_audit_log(x)

dcc_cleaned(x)

Arguments

Value

dcc_audit_log returns the cell-level audit log (data.table with columns record_id, variable, old_value, new_value, action, check_id, method, timestamp, dcc_version, ruleset_hash, keyfile_hash). dcc_cleaned returns the new dcc_data version.

Examples

df <- data.frame(sid = "S1", q1 = 9)
f <- dcc_findings("S1", variable = "q1", check_id = "C",
                  evidence = "legacy code")
res <- dcc_execute(df, f, actions = list(C = "set_na"), id_var = "sid")
dcc_audit_log(res)
dcc_cleaned(res)

Description

Returns a versioned, deterministic description of every public capability, rule type, action type, and input format, plus the operations DCC deliberately does not support. General-purpose callers (including AI systems) can query it to discover what is Stable, Experimental, or Planned before building a pipeline. The status of each feature reflects the implemented state of the installed package, not a roadmap. Contract version 1.2 identifies invalid-numeric detection, declared YAML IDs, terminal dispositions, and atomic run publication as Stable capabilities.

Usage

dcc_capabilities()

Value

A named list with contract_version (the capability-contract version), package_version (the installed DCC version), features (a data.frame of name, status – "Stable"/"Experimental"/"Planned" – and since), rule_types, action_types, formats (a data.frame of format, status, extensions, backend, semantics, and limitations), and unsupported (operations DCC does not perform).

See Also

dcc_schema for the formal object schemas.

Examples

caps <- dcc_capabilities()
caps$action_types
caps$features[caps$features$status == "Stable", "name"]

Description

Validates the plan, performs a strict canonical import, runs environment and data checks, and previews findings. It writes diagnostics and a bilingual staff report only; no action, cleaned dataset, audit log, or manifest is produced.

Usage

dcc_check(data, plan, output_dir)

Arguments

Value

A dcc_check_result with status, validation, findings, imported data, and written files.

Description

Returns the table of changes a codebook preview would apply.

Usage

dcc_codebook_changes(x)

Arguments

Value

A data.table of variable, op, and detail.

Examples

df <- data.frame(sid = "S1", age = -99)
prev <- dcc_apply_codebook(df, list(age = list(missing = -99)))
dcc_codebook_changes(prev)

Description

Bundles a rule set, an action map, a record-id column, and the item columns into a single object that dcc_run consumes.

Usage

dcc_config(rules, actions = list(), id_var = NULL, items = NULL)

Arguments

Value

A dcc_config object.

See Also

dcc_run, dcc_validate_config.

Examples

rf <- tempfile(fileext = ".yaml")
writeLines(c("checks:", "  - id: R001", "    type: range",
             "    variable: score", "    min: 0", "    max: 100"), rf)
if (requireNamespace("yaml", quietly = TRUE)) {
  dcc_config(dcc_rules(rf), actions = list(R001 = "set_na"), id_var = "sid")
}

Description

A dcc_data object bundles the dataset with its metadata, the level-0 read report, and an append-only provenance chain. Every DCC stage (detect, execute, report) receives and returns this container; stages append to the provenance chain and never rewrite it (raw data is immutable; cleaning produces new versions).

Usage

dcc_data(data, meta = list(), read_report = NULL, provenance = NULL,
  dictionary = NULL, missing_states = NULL, import_spec = NULL)

Arguments

Value

An object of class dcc_data: a list with elements data (a data.table), meta, read_report, provenance, dictionary, missing_states, and import_spec.

Examples

x <- dcc_data(data.frame(id = 1:3, score = c(90, 85, 77)))
dcc_provenance(x)

Description

Evaluates every check in a rule set and returns the combined findings table. Detection is pure and read-only: the same data and the same rule set always produce the same findings, and the input is never modified. Range checks report non-missing values that cannot be converted to numeric with code INVALID_NUMERIC; numeric bounds violations use OUT_OF_RANGE.

Usage

dcc_detect(x, rules, id_var = NULL)

Arguments

Value

A dcc_findings table. If x is a dcc_data, the result carries a dcc_data attribute: the input container with a detect provenance record (rule file hash, findings count) appended.

Examples

df <- data.frame(sid = c("S1", "S2"), score = c(50, 150))
f <- tempfile(fileext = ".yaml")
writeLines(c(
  "checks:",
  "  - id: R001",
  "    type: range",
  "    variable: score",
  "    min: 0",
  "    max: 100"
), f)
if (requireNamespace("yaml", quietly = TRUE)) {
  dcc_detect(df, dcc_rules(f), id_var = "sid")
}

Description

Larger-than-memory detection with an adaptive backend: chunks (or Arrow record batches) of chunk_size rows are read and checked one at a time, so peak memory is bounded by the chunk. Findings are identical to an in-memory dcc_detect for record-local checks (range, set, missing_items, straightlining, trap_items, and response_time with the median-relative cut disabled via min_median_ratio: ~). Cross-record checks (score_anomaly, median-relative response time) are rejected with typed errors; expr rules must not use aggregate functions.

Usage

dcc_detect_chunked(path, rules, chunk_size = 100000L, id_var = NULL,
  sep = NULL, backend = c("auto", "csv", "arrow"), encoding = "auto")

Arguments

Details

Two backends share this entry point and produce identical findings: the csv backend streams a delimited file with fread (fread-native UTF-8/latin1 encoding only; column types are locked from the first chunk so later chunks cannot drift; each record must lie on a single line, so embedded newlines in quoted fields are unsupported – read such files whole with dcc_read), and the arrow backend streams a Parquet/Feather file as record batches (requires the arrow package; types come from the file schema and the columnar format is always UTF-8, so the encoding restriction does not apply). With backend = "auto" the backend is chosen from the file extension: arrow for .parquet/.feather, csv for .csv/.tsv/.txt.

Value

A dcc_findings table with n_rows (total rows scanned), n_chunks, and backend attributes.

See Also

dcc_detect for in-memory detection.

Examples

csv <- tempfile(fileext = ".csv")
writeLines(c("sid,score", "S1,90", "S2,150", "S3,70"), csv)
rules_file <- tempfile(fileext = ".yaml")
writeLines(c(
  "checks:",
  "  - id: R001",
  "    type: range",
  "    variable: score",
  "    min: 0",
  "    max: 100"
), rules_file)
if (requireNamespace("yaml", quietly = TRUE)) {
  # stream the file two rows at a time; encoding set explicitly since
  # short ASCII files defeat charset auto-detection
  dcc_detect_chunked(csv, dcc_rules(rules_file), chunk_size = 2L,
                     id_var = "sid", encoding = "UTF-8")
}

Description

Reads up to n_bytes from the file and detects the most likely character encoding via stringi::stri_enc_detect(). Detected encodings are normalized to the canonical names DCC supports as first-class: "UTF-8", "GB18030" (covers GBK/GB2312), "BIG5", and "latin1" (covers ISO-8859-1/windows-1252).

Usage

dcc_detect_encoding(path, n_bytes = 65536L)

Arguments

Value

A list with elements encoding (normalized name), confidence (0-1), and candidates (data.frame of raw detector output).

Examples

f <- tempfile(fileext = ".csv")
writeLines("id,name", f)
dcc_detect_encoding(f)$encoding

Description

Returns the declared source name, canonical name, type, role, and any adapter metadata retained for each imported variable.

Usage

dcc_dictionary(x)

Arguments

Value

A copy of the canonical variable dictionary.

Description

Returns one terminal disposition for every finding. Dispositions are the execution source of truth and are reconciled against the audit log.

Usage

dcc_dispositions(x)

Arguments

Value

A data.table with finding_id, action, status, and message. Status is one of "changed", "excluded", "flagged", "skipped", "failed", or "unhandled".

Description

Runs the requested rule, data, and registered-format backend checks and merges their structured reports without changing data or files.

Usage

dcc_doctor(data = NULL, rules = NULL, id_var = NULL, formats = NULL)

Arguments

Value

A combined dcc_validation object.

Examples

rf <- tempfile(fileext = ".yaml")
writeLines(c("checks:", "  - id: R001", "    type: range",
             "    variable: score", "    min: 0", "    max: 100"), rf)
df <- data.frame(sid = c("S1", "S2"), score = c(50, 70))
if (requireNamespace("yaml", quietly = TRUE)) {
  dcc_doctor(df, dcc_rules(rf), id_var = "sid")
}

Description

Applies declarative actions to detected findings under the closed-loop rule: only cells and records named in the findings list are ever touched, and every change is logged at cell level (old value, new value, triggering check, method, timestamps, versions) carrying the exact finding_id that produced it. The whole plan is validated before any data changes – unknown action IDs, unmapped recodes, missing or duplicated record ids, and group-level cell actions are errors. Findings without a mapped action are returned unhandled rather than silently flagged or dropped. A cell action made inapplicable by an earlier record exclusion is recorded as skipped. The input is never modified.

Usage

dcc_execute(x, findings, actions = list(), id_var = NULL,
  default = "flag", ruleset_hash = NULL)

Arguments

Value

A dcc_result: list with data (the new dcc_data version), audit (cell-level audit log whose first column is finding_id), unhandled (findings with no explicit action), dispositions (one terminal row per finding), report_profile (aggregate pre-cleaning types, missingness, and complete frequency counts without raw rows), and n_excluded. Accessors: dcc_audit_log, dcc_cleaned, dcc_dispositions.

Examples

df <- data.frame(sid = c("S1", "S2"), score = c(50, 150))
f <- dcc_findings("S2", variable = "score", check_id = "R001",
                  evidence = "out of range", severity = "fail")
res <- dcc_execute(df, f, actions = list(R001 = "set_na"),
                   id_var = "sid")
dcc_audit_log(res)

Description

Writes the cell-level audit log to disk. Parquet is the default storage format (design decision 3 in docs/design.md); CSV export exists so external auditors can open the log without special tooling.

Usage

dcc_export_log(x, path, format = c("parquet", "csv"))

Arguments

Value

path, invisibly.

Examples

df <- data.frame(sid = "S1", q1 = 9)
f <- dcc_findings("S1", variable = "q1", check_id = "C",
                  evidence = "legacy code")
res <- dcc_execute(df, f, actions = list(C = "set_na"), id_var = "sid")
csv <- tempfile(fileext = ".csv")
dcc_export_log(res, csv, format = "csv")

Description

A dcc_findings object is the structured violation list produced by the Detect stage and consumed by the Execute stage: columns finding_id, record_id, variable, check_id, evidence, severity, dimension, code and detector_id. The additive finding_id is deterministic within a run and includes the rule, record, variable, and zero-based occurrence. It is the single interface between detection and execution in the Detect-Execute-Report workflow.

Usage

dcc_findings(record_id = character(), variable = NA_character_,
  check_id = character(), evidence = character(), severity = "warn",
  dimension = NA_character_, run_id = "manual", code = check_id,
  detector_id = check_id)

Arguments

Value

A dcc_findings object (also a data.table).

Examples

dcc_findings(record_id = "S001", check_id = "R001",
             evidence = "value 7 outside range [1, 5]",
             severity = "fail", dimension = "validity")

Description

Returns stable plain-language explanations and suggested fixes for codes that can appear in strict-plan validation and preflight diagnostics.

Usage

dcc_help(code = NULL, language = "zh-CN")

Arguments

Value

A data.frame with code, explanation, and fix.

Description

Reads a source through its registered format adapter and applies an explicit import specification. Source names, canonical names, types, missing codes, and roles are declared rather than guessed. The source file is never modified.

Usage

dcc_import(path, spec)

Arguments

Value

A dcc_data object with canonical data, dictionary, missing states, import specification, source metadata, and import provenance.

Description

Returns the resolved form-to-master item map attached by dcc_map_forms. This is the public accessor for the mapping; callers should not read the hidden attribute directly.

Usage

dcc_item_map(x)

Arguments

Value

The item-map data.frame (master, form, source, is_anchor, ...).

Examples

data <- data.frame(sid = c("S1", "S2"), form = c("A", "B"),
                   p1 = c(1, 2), p2 = c(5, 6))
fmap <- data.frame(form = c("A", "A", "B", "B"),
                   source = c("p1", "p2", "p1", "p2"),
                   master = c("M001", "M002", "M003", "M002"),
                   is_anchor = c(FALSE, TRUE, FALSE, TRUE))
mapped <- dcc_map_forms(data, fmap, form_var = "form")
dcc_item_map(mapped)

Description

Runs Eurostat-style level-0 (structural) validation on a freshly read table: dimensions, per-column type and missingness profile, duplicate or empty column names, all-missing columns and rows, and encoding confidence. Findings use the same shape as later detection stages so the read report feeds the same audit pipeline.

Usage

dcc_l0_diagnose(data, meta = list())

Arguments

Value

A dcc_read_report object: a list with n_rows, n_cols, columns (per-column profile), and findings (L0 findings table with columns check_id, severity, variable, evidence).

Examples

rep <- dcc_l0_diagnose(data.frame(a = c(1, NA), b = c(NA, NA)))
rep$findings

Description

Captures everything needed to re-execute the read -> detect -> execute pipeline and verify byte-identical results: input file path and hash, rule file path and hash, the executed actions, id/default configuration, and content hashes of the cleaned data and the audit log (timestamps excluded).

Usage

dcc_manifest(x, path = NULL)

Arguments

Value

A dcc_manifest object (named list with input, ruleset, action and output-hash sections), invisibly written to path when given.

See Also

dcc_rerun

Examples

csv <- tempfile(fileext = ".csv")
writeLines(c("sid,score", "S1,90", "S2,150"), csv)
rules_file <- tempfile(fileext = ".yaml")
writeLines(c(
  "checks:",
  "  - id: R001",
  "    type: range",
  "    variable: score",
  "    min: 0",
  "    max: 100"
), rules_file)
if (requireNamespace("yaml", quietly = TRUE)) {
  x <- dcc_read(csv)
  f <- dcc_detect(x, dcc_rules(rules_file), id_var = "sid")
  res <- dcc_execute(x, f, actions = list(R001 = "set_na"),
                     id_var = "sid")
  dcc_manifest(res)
}

Description

Aligns item columns from multiple test forms onto the master item bank using an external form-item mapping table. Items not administered on a respondent's form are structural NA – the concurrent-calibration layout consumed by the downstream IRTC engine. Anchor flags are carried through for fixed-anchor equating. Mapping problems are findings (MAP_SOURCE_MISSING, MAP_UNKNOWN_FORM), not silent drops.

Usage

dcc_map_forms(x, form_item_map, form_var)

Arguments

Value

A new dcc_data version: non-item columns pass through, consumed source columns are dropped, one column per master item is appended (NA where not administered). The normalized item map (with is_anchor) is attached as the dcc_item_map attribute, mapping findings as the dcc_findings attribute, and a map_forms provenance record is appended.

Examples

df <- data.frame(sid = c("S1", "S2"), form = c("A", "B"),
                 p1 = c("X", "Y"))
map <- data.frame(form = c("A", "B"), source = c("p1", "p1"),
                  master = c("M001", "M002"))
as.data.frame(dcc_map_forms(df, map, form_var = "form"))

Description

Returns the mapping-problem findings attached by dcc_map_forms. This is the public accessor; callers should not read the hidden attribute directly.

Usage

dcc_mapping_findings(x)

Arguments

Value

A dcc_findings table (possibly empty) of mapping problems (unknown forms, missing source items).

Examples

data <- data.frame(sid = c("S1", "S2"), form = c("A", "B"),
                   p1 = c(1, 2), p2 = c(5, 6))
fmap <- data.frame(form = c("A", "A", "B", "B"),
                   source = c("p1", "p2", "p1", "p2"),
                   master = c("M001", "M002", "M003", "M002"),
                   is_anchor = c(FALSE, TRUE, FALSE, TRUE))
mapped <- dcc_map_forms(data, fmap, form_var = "form")
dcc_mapping_findings(mapped)

Description

Returns explicit missing semantics for imported and cleaned cells, including not administered, respondent omission, import missing, declared missing code, and cleared by cleaning.

Usage

dcc_missing_states(x)

Arguments

Value

A copy of the cell-level missing-state table.

Description

Returns the append-only provenance chain recording every stage the object has passed through (read, detect, execute, ...). This chain is the backbone of DCC's auditable-reporting guarantee: any dataset version can be traced back to its source file and rule versions. Legacy records containing only timestamp remain readable.

Usage

dcc_provenance(x)

Arguments

Value

A data.table with one row per provenance record: stage, started_at, ended_at, outcome, dcc_version, and list-columns hashes, counts, and details.

Examples

x <- dcc_data(data.frame(id = 1:2))
dcc_provenance(x)

Description

Compatibility entry point over DCC's registered format adapters. New strict workflows use dcc_import with a declared import specification; this function retains automatic text-encoding detection and type inference for existing calls. The raw file is never modified.

Usage

dcc_read(path, format = "auto", encoding = "auto", ...)

Arguments

Value

A dcc_data object with meta, a read report, and a provenance chain whose first record is the read operation.

Examples

f <- tempfile(fileext = ".csv")
writeLines(c("id,score", "S1,90", "S2,85"), f)
x <- dcc_read(f)
dcc_read_report(x)

Description

Converts an Excel cleaning-plan workbook into a dcc_config, so survey staff specify the record ID, item columns, rules, and dispositions in a spreadsheet rather than writing YAML.

Usage

dcc_read_config(path)

Arguments

Details

The workbook has two sheets. settings has key/value rows (id_var, optional items as a comma-separated list). rules has one row per check with columns id, type, variable, min, max, values, items, max_prop, max_run, time_var, min_seconds, traps, severity, action, and recode_map. Write a starter workbook with dcc_write_config_template.

Value

A dcc_config.

See Also

dcc_write_config_template, dcc_config, dcc_run.

Examples

if (requireNamespace("writexl", quietly = TRUE) &&
    requireNamespace("readxl", quietly = TRUE)) {
  path <- tempfile(fileext = ".xlsx")
  dcc_write_config_template(path)
  dcc_read_config(path)
}

Description

Reads only the exact version-1.0 contract. Unknown, missing, reordered, or renamed workbook sheets and columns are rejected instead of guessed.

Usage

dcc_read_plan(path)

Arguments

Value

A dcc_plan. Excel plans retain cell-location metadata used by dcc_validate_plan(); JSON validation uses JSON Pointers.

Description

Accessor for the level-0 read report produced by dcc_read: dimensions, per-column profile, encoding information, and structural findings.

Usage

dcc_read_report(x)

Arguments

Value

The dcc_read_report attached at read time (see dcc_l0_diagnose), or NULL if the object was not created by dcc_read.

Examples

f <- tempfile(fileext = ".csv")
writeLines(c("id,score", "S1,90"), f)
dcc_read_report(dcc_read(f))

Description

Verifies DCC's closed-loop guarantee on the exact finding identity: every audit-log row must join back to a finding by finding_id, and every finding is assigned exactly one terminal status. There is no loose record_id + check_id matching, so a change can never be attributed to the wrong finding and an unhandled finding can never be reported as handled. An audit row whose finding_id is absent from the findings table, or a handled disposition without matching audit evidence, raises a dcc_reconcile_error.

Usage

dcc_reconcile(x)

Arguments

Value

The findings table extended with the recorded action, status, message, and handled. Status is one of "changed", "excluded", "flagged", "skipped", "failed", or "unhandled".

Examples

df <- data.frame(sid = "S1", q1 = 9)
f <- dcc_findings("S1", variable = "q1", check_id = "C",
                  evidence = "legacy code")
res <- dcc_execute(df, f, actions = list(C = "set_na"), id_var = "sid")
dcc_reconcile(res)

Description

Renders a self-contained HTML report in two audiences: a management summary (findings by quality dimension and severity, change volumes, exclusions, provenance and hashes) and an audit report that adds the reconciliation table and the cell-level change log. HTML is generated directly, without a pandoc/rmarkdown dependency.

Usage

dcc_report(x, path = NULL, audience = c("summary", "audit"),
  max_rows = 1000L)

Arguments

Value

The HTML document as a character string, invisibly. Written to path when given.

Examples

df <- data.frame(sid = c("S1", "S2"), score = c(50, 150))
f <- dcc_findings("S2", variable = "score", check_id = "R001",
                  evidence = "out of range", severity = "fail",
                  dimension = "validity")
res <- dcc_execute(df, f, actions = list(R001 = "set_na"),
                   id_var = "sid")
html <- dcc_report(res, audience = "audit")
substr(html, 1, 60)

Description

Writes deterministic JSON and JSONL artifacts, an SHA-256 manifest, and the versioned schemas an AI agent or external system needs to validate them.

Usage

dcc_report_machine(model, output_dir)

Arguments

Value

Paths to the eight machine files and the schemas directory.

Description

Creates the single normalized source of facts consumed by staff, statistical, and machine report renderers. The constructor copies source objects and verifies counts, finding identities, hashes, and timings.

Usage

dcc_report_model(result, run = NULL)

dcc_validate_report_model(x)

Arguments

Value

dcc_report_model() returns a versioned dcc_report_model list. dcc_validate_report_model() returns a structured dcc_validation table with stable error codes.

Description

Produces the staff workbook, dependency-free HTML report, and concise text summary from one normalized model. Sensitive examples are masked by default, and Excel row limits are checked before writing so data are never truncated.

Usage

dcc_report_staff(
  model,
  output_dir,
  formats = c("xlsx", "html"),
  language = c("zh-CN", "en"),
  include_examples = FALSE
)

Arguments

Value

Character paths of files written, including run-summary.txt.

Description

Writes complete findings, audit, reconciliation, before/after profiles, scoring, mapping, provenance, parameters, and an optional methods narrative. The artifact manifest records SHA-256 hashes after every artifact is closed.

Usage

dcc_report_statistical(
  model,
  output_dir,
  table_format = c("parquet", "csv"),
  html = TRUE
)

Arguments

Value

Character paths of every file written.

Description

Implements one-command reproducibility (design principle 7): reads the raw input again and verifies its hash, reloads and verifies the rule file, re-runs detect and execute with the recorded actions, and compares the cleaned data and audit log (excluding timestamps) against the manifest hashes. An input or rule file whose hash no longer matches raises a typed error – changed inputs make reproduction claims meaningless.

Usage

dcc_rerun(manifest)

Arguments

Value

A dcc_rerun object: list with reproduced (logical), data_match, audit_match, and the re-run result.

See Also

dcc_manifest

Examples

csv <- tempfile(fileext = ".csv")
writeLines(c("sid,score", "S1,90", "S2,150"), csv)
rules_file <- tempfile(fileext = ".yaml")
writeLines(c(
  "checks:",
  "  - id: R001",
  "    type: range",
  "    variable: score",
  "    min: 0",
  "    max: 100"
), rules_file)
if (requireNamespace("yaml", quietly = TRUE)) {
  x <- dcc_read(csv)
  f <- dcc_detect(x, dcc_rules(rules_file), id_var = "sid")
  res <- dcc_execute(x, f, actions = list(R001 = "set_na"),
                     id_var = "sid")
  # re-run from the manifest and confirm byte-identical reproduction
  dcc_rerun(dcc_manifest(res))$reproduced
}

Description

Returns bounded, deterministic fields for AI agents without requiring them to parse console prose or hidden R attributes.

Usage

dcc_result_summary(result, detail = c("compact", "full"))

Arguments

Value

A named structured list containing stable action codes.

Description

Rule files are YAML with embedded R expressions for complex logic. The top-level key checks holds a list of rules; each rule has id, type, an optional severity and dimension, and type-specific fields: range (variable, min/max), set (variable, values), expr (an R expression evaluated per record in a restricted environment), skip_logic (when {variable, equals} and then_not_required, marking skipped items as not administered for the missing-items detector), or a detector type (missing_items, straightlining, response_time, trap_items, score_anomaly) whose fields are passed to the matching detect_*() function.

Usage

dcc_rules(path)

Arguments

Value

A dcc_ruleset object (list of normalized rules, with the source file and its MD5 hash attached for the audit trail).

Examples

f <- tempfile(fileext = ".yaml")
writeLines(c(
  "checks:",
  "  - id: R001",
  "    type: range",
  "    variable: score",
  "    min: 0",
  "    max: 100"
), f)
if (requireNamespace("yaml", quietly = TRUE)) {
  dcc_rules(f)
}

Description

The survey-staff entry point: orchestrates the Detect -> Execute -> Report pipeline from a dcc_config or strict plan and writes a fixed output layout. Preview is the default, so the safe path requires no extra care, and the raw input file is never modified in any mode. Files are written to a same-parent staging directory and published atomically. Existing output directories are never overwritten; failed runs publish a diagnostic .failed-<run_id> directory and raise dcc_run_error. A renderer failure publishes cleaning evidence under .partial-<run_id> and records the failed audience without claiming full success.

Usage

dcc_run(data, config = NULL, output_dir,
  mode = c("preview", "execute", "verify", "rerun"), id_var = NULL,
  plan = NULL)

Arguments

Details

Modes: "preview" detects and reports only (no data change, no cleaned-data.csv); "execute" applies the configured actions and writes the cleaned data, audit log, and manifest; "verify" is like execute with a reconciliation summary; "rerun" reproduces a previous run from its manifest.yaml; pass the manifest path as data and use a new output_dir.

Output layout under output_dir: cleaned-data.csv (execute/verify), findings.xlsx (or findings.csv without the writexl package), audit-log.csv (execute/verify), management-report.html, audit-report.html, manifest.yaml (execute/verify), run-summary.txt, run-manifest.json, and selected staff/, statistical/, and machine/ audience directories.

Value

A dcc_run object with mode, terminal status, config, written paths (via dcc_run_files), normalized report model, and structured run manifest.

See Also

dcc_config, dcc_run_files, dcc_doctor.

Examples

rf <- tempfile(fileext = ".yaml")
writeLines(c("checks:", "  - id: R001", "    type: range",
             "    variable: score", "    min: 0", "    max: 100"), rf)
csv <- tempfile(fileext = ".csv")
writeLines(c("sid,score", "S1,90", "S2,150"), csv)
if (requireNamespace("yaml", quietly = TRUE)) {
  cfg <- dcc_config(dcc_rules(rf), actions = list(R001 = "set_na"),
                    id_var = "sid")
  run <- dcc_run(csv, cfg, tempfile("dcc-out"), mode = "preview")
  dcc_run_files(run)
}

Description

Returns the output paths written by dcc_run.

Usage

dcc_run_files(x)

Arguments

Value

A character vector of the file paths the run wrote.

Examples

rf <- tempfile(fileext = ".yaml")
writeLines(c("checks:", "  - id: R001", "    type: range",
             "    variable: score", "    min: 0", "    max: 100"), rf)
csv <- tempfile(fileext = ".csv")
writeLines(c("sid,score", "S1,90", "S2,150"), csv)
if (requireNamespace("yaml", quietly = TRUE)) {
  cfg <- dcc_config(dcc_rules(rf), id_var = "sid")
  dcc_run_files(dcc_run(csv, cfg, tempfile("dcc-out")))
}

Description

Returns the formal JSON Schema (draft-07) for one of DCC's public objects. The schemas are versioned artifacts installed with the package under inst/schemas/, so AI systems and external validators can check a strict plan, normalized report model, rule file, action map, findings table, disposition, provenance, audit log, or manifest against a stable contract.

Usage

dcc_schema(name, as = c("object", "path"))

Arguments

Value

The parsed schema (a list) or the schema file path.

See Also

dcc_capabilities for the capability document.

Examples

dcc_schema("finding", as = "path")
if (requireNamespace("jsonlite", quietly = TRUE)) {
  dcc_schema("actions")$title
}

Description

Scores responses using an external, versioned answer key. Single-choice items get full points on exact match. Multiple-select items (responses like "AC" or "A,C") are all-or-nothing by default; with partial = TRUE the score is points * max(0, (hits - false_alarms) / n_key). When omit_policy = "na", a row with no observed item scores has an NA total rather than zero.

Usage

dcc_score(x, answer_key, omit_policy = c("zero", "na"),
  scoring_fn = NULL)

Arguments

Value

A new dcc_data version with one <item>_score column per keyed item and a total_score column appended, plus a score provenance record (key source, key hash, omit policy).

Examples

df <- data.frame(sid = c("S1", "S2"),
                 it1 = c("A", "B"), it2 = c("AC", "A"))
key <- data.frame(item = c("it1", "it2"), key = c("A", "AC"),
                  type = c("single", "multiple"))
as.data.frame(dcc_score(df, key))

Description

Writes a protected version-1.0 workbook for survey staff. Machine headers and workbook structure are locked; yellow input cells remain editable. Sheet protection has no password and prevents accidental edits only.

Usage

dcc_template(path, language = "zh-CN")

Arguments

Value

The normalized destination path, invisibly.

Examples

path <- tempfile(fileext = ".xlsx")
dcc_template(path)
file.exists(path)

Description

Reverse lookup from the cleaned data back through the pipeline: all findings and all logged changes for one record, optionally narrowed to one cell. This implements the auditable-reporting requirement that any cell in the final dataset can be traced to its cleaning history.

Usage

dcc_trace(x, record_id, variable = NULL)

Arguments

Value

A dcc_trace object: list with record_id, variable, findings (matching findings rows) and changes (matching audit rows).

Examples

df <- data.frame(sid = "S1", q1 = 9)
f <- dcc_findings("S1", variable = "q1", check_id = "C",
                  evidence = "legacy code")
res <- dcc_execute(df, f, actions = list(C = "set_na"), id_var = "sid")
dcc_trace(res, "S1", "q1")

Description

Returns the findings that had no explicit action in dcc_execute. This is the public accessor for the result's unhandled set; callers should not read the underlying list element directly.

Usage

dcc_unhandled(x)

Arguments

Value

A dcc_findings table (possibly empty) of findings that had no explicit action and were therefore neither changed nor dispositioned.

Examples

df <- data.frame(sid = "S1", q1 = 9)
f <- dcc_findings("S1", variable = "q1", check_id = "C", evidence = "e")
res <- dcc_execute(df, f, actions = list(), id_var = "sid")
dcc_unhandled(res)

Description

Runs dcc_validate_rules over the config's rules and additionally checks that every action targets a check_id the rules can produce.

Usage

dcc_validate_config(config)

Arguments

Value

A dcc_validation object.

Examples

rf <- tempfile(fileext = ".yaml")
writeLines(c("checks:", "  - id: R001", "    type: range",
             "    variable: score", "    min: 0", "    max: 100"), rf)
if (requireNamespace("yaml", quietly = TRUE)) {
  cfg <- dcc_config(dcc_rules(rf), actions = list(R001 = "set_na"))
  dcc_validate_config(cfg)
}

Description

Checks that a dataset can carry a cleaning run: the record-id column is present, non-missing, and unique, and every variable a rule references exists. It never changes the data.

Usage

dcc_validate_data(data, rules = NULL, id_var = NULL)

Arguments

Value

A dcc_validation object (see dcc_validate_rules).

See Also

dcc_validate_rules, dcc_doctor.

Examples

df <- data.frame(sid = c("S1", "S1", "S2"), score = c(50, 150, 70))
dcc_validate_data(df, id_var = "sid")

Description

Uses DCC's built-in structural validator, avoiding an additional runtime dependency. Published schema files remain compatible with full external JSON Schema validators.

Usage

dcc_validate_json(path, schema)

dcc_validate_jsonl(path, schema)

Arguments

Value

TRUE when the artifact matches the published contract.

Description

Validates the common versioned contract used by strict Excel workbooks and JSON plans. Validation is read-only and returns stable issue codes suitable for staff help pages and AI agents.

Usage

dcc_validate_plan(x)

Arguments

Value

A dcc_validation table. Blocking rows have severity "fail".

Description

Checks a dcc_rules rule set for structural problems – unknown types, missing required fields, duplicate or empty IDs – and returns a structured report. It never evaluates rules against data and never changes anything.

Usage

dcc_validate_rules(rules)

Arguments

Value

A dcc_validation object: a data.table with code, severity, field, rows (affected row indices, a list column), fix, and optional workbook location fields workbook, sheet, row, column, and cell.

See Also

dcc_validate_data, dcc_doctor.

Examples

rf <- tempfile(fileext = ".yaml")
writeLines(c("checks:", "  - id: R001", "    type: range",
             "    min: 0", "    max: 100"), rf)
if (requireNamespace("yaml", quietly = TRUE)) {
  dcc_validate_rules(dcc_rules(rf))
}

Description

Filters a validation report to only the blocking ("fail") issues.

Usage

dcc_validation_errors(x)

Arguments

Value

The subset of x with severity == "fail".

Examples

df <- data.frame(sid = c("S1", "S1"), score = c(50, 70))
dcc_validation_errors(dcc_validate_data(df, id_var = "sid"))

Description

Writes an example two-sheet cleaning-plan workbook that dcc_read_config can read, for survey staff to edit.

Usage

dcc_write_config_template(path)

Arguments

Value

path, invisibly.

See Also

dcc_read_config.

Examples

if (requireNamespace("writexl", quietly = TRUE)) {
  dcc_write_config_template(tempfile(fileext = ".xlsx"))
}

Description

Flags respondents whose proportion of missing item responses exceeds max_prop. Like all detectors, it only finds; exclusion happens in the Execute stage.

Usage

detect_missing_items(x, items, max_prop = 0.5, id_var = NULL,
  severity = "warn", structural = NULL)

Arguments

Value

A dcc_findings table (check id Q_MISSING_ITEMS, dimension completeness).

Examples

df <- data.frame(sid = c("S1", "S2"),
                 q1 = c(1, NA), q2 = c(2, NA), q3 = c(3, 1))
detect_missing_items(df, c("q1", "q2", "q3"), max_prop = 0.5,
                     id_var = "sid")

Description

Flags respondents whose total response time is below an absolute minimum, or below a fraction of the median time. Each finding's evidence states which cut was triggered.

Usage

detect_response_time(x, time_var, min_seconds = NULL,
  min_median_ratio = 1/3, id_var = NULL, severity = "warn")

Arguments

Value

A dcc_findings table (check id Q_RESPONSE_TIME).

Examples

df <- data.frame(sid = c("S1", "S2", "S3"),
                 time_total = c(600, 45, 590))
detect_response_time(df, "time_total", min_seconds = 60, id_var = "sid")

Description

Flags respondents whose score is an outlier within their group (IQR fences or z-scores), and groups whose mean deviates strongly from the overall mean.

Usage

detect_score_anomaly(x, score_var, group_vars = NULL,
  method = c("iqr", "zscore"), k = 1.5, group_mean_z = 2,
  id_var = NULL, severity = "warn")

Arguments

Value

A dcc_findings table (check ids Q_SCORE_OUTLIER and Q_GROUP_SCORE_SHIFT; group-level findings have record_id = NA and the group label in evidence).

Examples

df <- data.frame(sid = sprintf("S%d", 1:8),
                 grp = rep(c("A", "B"), each = 4),
                 score = c(80, 82, 15, 81, 60, 62, 61, 59))
detect_score_anomaly(df, "score", group_vars = "grp", id_var = "sid")

Description

Computes the longest run of identical consecutive item responses per respondent (the longstring index; cf. the CRAN package careless) and flags respondents whose run meets or exceeds max_run. The computation is vectorized over respondents.

Usage

detect_straightlining(x, items, max_run = 10L, id_var = NULL,
  severity = "warn", na_breaks_run = TRUE)

Arguments

Value

A dcc_findings table (check id Q_STRAIGHTLINING).

Examples

df <- data.frame(sid = c("S1", "S2"),
                 q1 = c(1, 4), q2 = c(2, 4), q3 = c(1, 4), q4 = c(3, 4))
detect_straightlining(df, paste0("q", 1:4), max_run = 4, id_var = "sid")

Description

Compares responses on designated trap (attention-check) items with their expected values and flags respondents failing at least max_failed traps. Trap definitions are typically maintained in an external, versioned key file.

Usage

detect_trap_items(x, traps, max_failed = 1L, id_var = NULL,
  severity = "fail", na_fails = TRUE)

Arguments

Value

A dcc_findings table (check id Q_TRAP_ITEMS).

Examples

df <- data.frame(sid = c("S1", "S2"), trap1 = c(3, 5))
detect_trap_items(df, traps = list(trap1 = 3), id_var = "sid")